Zoi Rapti's Publications
  1. Stability of a stochastic two-dimensional non-Hamiltonian system, (with R. E. Lee DeVille and N. Sri Namachchivaya), SIAM J. Appl. Math. 71, 1458-1475 (2011).

  2. The transfer integral operator method in the study of DNA unzipping and bubble formation, (with K. O. Rasmussen and A. R. Bishop), Journal of Nonlinear Mathematical Physics 18 (2), 381-396 (2011).

  3. Counting defect modes in periodic eigenvalue problems, (with J. Bronski), SIAM J. Math. Anal. 43, no. 2, 803–827 (2011).

  4. Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites, (with M. R. Kantorovitz, V. Gelev, and A. Usheva), BMC Bioinformatics 11, 604 (2010).

  5. Stationary solutions for a modified Peyrard-Bishop DNA model with up to third-neighbor interactions, Eur. Phys. J. E 32, 209-216 (2010).

  6. Soliton dynamics in linearly coupled discrete nonlinear Schrödinger equations (with A. Trombettoni, H. E. Nistazakis, D. J. Frantzeskakis, P. G. Kevrekidis), Mathematics and Computers in Simulation 80, 814–824 (2009).

  7. Rabi switch of condensate wave functions in a multicomponent Bose gas (with H. E. Nistazakis, D. J. Frantzeskakis, P. G. Kevrekidis, P. Sodano, and A. Trombettoni), Phys. Rev. A 78, 023635 (2008).

  8. Profiling the thermodynamic softness of adenoviral promoters (with Chu Hwan Choi, Vladimir Gelev, et. al.), Biophys. J. Vol. 95, 597-608 (2008).

  9. Solitary Waves Under the Competition of Linear and Nonlinear Periodic Potentials (with P.G. Kevrekidis, V.V. Konotop, and C.K.R.T. Jones), J. Phys. A., 40, 14151-14163 (2007).

  10. Healing Length and Bubble Formation in DNA (with A. Smerzi, K.O. Rasmussen, A.R. Bishop, C.H. Choi and A. Usheva), Phys. Rev. E. Vol. 73, 051902 (2006).

  11. Lengthscales and Cooperativity in DNA Bubble Formation (with A. Smerzi, K.O. Rasmussen, A.R. Bishop, C.H. Choi and A. Usheva), Europhysics Letters, Vol. 74 (2006) 540-546.

  12. Modulational Instabilities for Nonlinear Schrodinger Equations With a Periodic Potential (with J. C. Bronski), Dynamics of PDE, Vol. 2 (2005) 335-355.

  13. Transient Radiative Behavior of Hamiltonian Systems in Finite Domains (with M.I. Weinstein and P.G. Kevrekidis), Physics Letters A, Vol. 345 (2005) 1-9.

  14. A Variational Approach to the Modulational Instability (with A. Smerzi, P.G. Kevrekidis and A.R. Bishop), Phys. Rev. E 69,017601 (2004).

  15. Modulational and Parametric Instabilities of the Discrete Nonlinear Schrodinger Equation (with P.G. Kevrekidis, A. Smerzi and A. R. Bishop), J. Phys. B: At. Mol. Opt. Phys. 37, (2004) S257-264.

  16. On the Modulational Instability of the Nonlinear Schrodinger Equation with Dissipation (with P.G. Kevrekidis, D.J. Frantzeskakis and B.A. Malomed), Phys. Scr. Vol. T 113, (2004) 74.

  17. Modulational Instability in Coupled Disrete Nonlinear Schrodinger Equations (with A. Trombettoni, P.G. Kevrekidis, D.J. Frantzeskakis, B.A. Malomed and A. R. Bishop), Physics Letters A Vol. 330, (2004) 95.

  18. Modulational Instability in Bose-Einstein Condensates under Feshbach Resonance Management (with G. Theocharis, P.G. Kevrekidis, D.J. Frantzeskakis and B.A. Malomed), Phys. Scr. Vol. T 107, (2004) 27.

  19. On the Modulational Stability of Gross-Pittaevskii Type Equations in 1+1 Dimensions (with G. Theocharis, P.G. Kevrekidis, D.J. Frantzeskakis and V.V. Konotop), Phys. Rev. A 67, 063610 (2003).

  20. On the Modulational Stability of Gross-Pittaevskii Type Equations in 1+1 Dimensions (with P.G. Kevrekidis and V.V. Konotop), Proceedings of the Third Conference on Localization and Energy Transfer in Nonlinear Systems, San Lorenzo de El Escorial Madrid, (2002).

  21. An Exterior Mixed Boundary Value Problem for the Helmholtz Equation (with K. Kiriaki), Bull. of the Greek Math. Soc. 45 (2001), 43-55.